MRIQC: individual bold report

Summary

  • BIDS filename: sub-1006_task-MID_run-03_bold.
  • Date and time: 2020-01-23, 00:29.
  • MRIQC version: 0.15.1.
  • Workflow details:
    • Framewise Displacement was computed using AFNI 3dvolreg
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot
Spikes
ICA components

Other

aor0.0028873962264150945
aqi0.00816379441509434
dummy_trs0
dvarsnstd26.3078902128788
dvarsstd1.4935835680681828
dvarsvstd1.0171523075757574
efc0.41494053715729334
fber6092.44091796875
fdmean0.1259252216845427
fdnum22
fdperc8.30188679245283
fwhmavg2.592116666666667
fwhmx2.49336
fwhmy2.8178466666666666
fwhmz2.4651433333333332
gcor0.00966768
gsrx-0.015490257181227207
gsry0.025858210399746895
sizet265
sizex80
sizey80
sizez52
snr4.824079074723545
spacingtr1.75
spacingx3.0
spacingy3.0
spacingz3.0
spikes_num4
summarybgk42.805651318212
summarybgmad97.79653930664062
summarybgmean430.8070983886719
summarybgmedian163.9744873046875
summarybgn239524.0
summarybgp0572.0581127166748
summarybgp951968.4239501953125
summarybgstdv907.2642211914062
summaryfgk3.8304171574167043
summaryfgmad1791.537353515625
summaryfgmean12668.1162109375
summaryfgmedian13026.01171875
summaryfgn44756.0
summaryfgp057115.485595703125
summaryfgp9515979.17822265625
summaryfgstdv2700.1767578125
tsnr66.62247467041016
AcquisitionMatrixPE80
AcquisitionNumber1
AcquisitionTime15:01:5.362500
BandwidthPerPixelPhaseEncode24.51
BaseResolution80
BodyPartExaminedBRAIN
CogAtlasIDTODO
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20190410 GCC6.3.0
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber166048
DwellTime2.8e-06
EchoTime0.029
EchoTrainLength80
EffectiveEchoSpacing0.000509996
FlipAngle74
ImageCommentsUnaliased_MB2_PE2_LB
ImageOrientationPatientDICOM[1, 0, 0, 0, 0.984503, -0.175367]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'NORM', 'MOSAIC']
ImagingFrequency123.246
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressNorth_13th_1701_Philadelphia_PA_US_19122
InstitutionNameTemple_University_-_Weiss_Hall
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PhaseEncodingDirectionj-
PhaseEncodingSteps80
PhaseResolution1
PixelBandwidth2230
ProcedureStepDescriptionSmith_Lab_Smith_iStart
ProtocolNamecmrr_mbep2d_mb2_3mm_task-MID_run0
PulseSequenceDetails%CustomerSeq%_cmrr_mbep2d_bold
ReceiveCoilActiveElementsHE1-4
ReceiveCoilNameHeadNeck_20
ReconMatrixPE80
RepetitionTime1.75
SAR0.0571236
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_80
SequenceVariantSK_SS
SeriesDescriptioncmrr_mbep2d_mb2_3mm_task-MID_run0
SeriesNumber33
ShimSetting[1417, -7415, 6475, 291, -42, 9, 43, 5]
SliceThickness3
SliceTiming[0, 1.2625, 0.7975, 0.3325, 1.595, 1.13, 0.665, 0.2, 1.4625, 0.9975, 0.5325, 0.065, 1.33, 0.865, 0.3975, 1.6625, 1.1975, 0.73, 0.265, 1.53, 1.065, 0.5975, 0.1325, 1.3975, 0.93, 0.465, 0, 1.2625, 0.7975, 0.3325, 1.595, 1.13, 0.665, 0.2, 1.4625, 0.9975, 0.5325, 0.065, 1.33, 0.865, 0.3975, 1.6625, 1.1975, 0.73, 0.265, 1.53, 1.065, 0.5975, 0.1325, 1.3975, 0.93, 0.465]
SoftwareVersionssyngo_MR_E11
SpacingBetweenSlices3
StationNameAWP166048
TaskNameMID
TotalReadoutTime0.0402897
TxRefAmp246.738
WipMemBlock8880b379-14b8-4ca9-abb4-6b610e2bf9b7||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sume2840f45771f3f28b020d36d094f62c7
softwaremriqc
version0.15.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.